BBMRIRP3 DATA ACCESS APPLICATION FORM FOR ACCESS TO BBMRIRP3

BBMRIRP3 DATA ACCESS APPLICATION FORM FOR ACCESS TO BBMRIRP3




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BBMRI-RP3 Data Access

Application Form for Access to BBMRI-RP3 Data

PLEASE SUBMIT COMPLETED, SIGNED AND DATED FORM BY EMAIL TO: [email protected]

  1. Name and position of the Applicant(s), including employment or affiliation with any organization

Please ensure that a full postal and email address is included for each applicant.



  1. Title of the study

In less than 30 words.



  1. Research Question

Please describe the study in no more than 750 words. Include:

    1. outline of the study design;

    2. an indication of the methodologies to be used;

    3. proposed use of the Project Data;

    4. preceding peer-reviews of the study (if any present);

    5. specific details of what you plan to do with the Project Data;

    6. timeline;

    7. key references.



  1. Consent and Approvals

If your proposed use of Project Data involves use of your own data, please confirm that you have obtained all approvals required by the rules and regulations of your jurisdiction, including your institution’s institutional rules, and the consent of your data subjects, for your use of your own data in the study, by ticking the following box: Yes, we have □.

  1. The nature and amount of Project Data applied for

Please specify the RNA sequencing data you request access to.




Please specify the methylation data you request access to.




Please specify the genotype data you request access to.




Please specify the phenotype data you request access to (see appendix A for available phenotypes).




Please specify the GONL RNA sequencing data you request access to




Please specify the GONL RNA methylation data you request access to




Please specify the Complete Genomics RNA sequencing data you request access to




Please specify the Complete Genomics methylation data you request access to




  1. Resources, Feasibility & Expertise

Please confirm that you have secured funding for your proposed use of the Project Data and that you will carry out your research within a reasonable period of time after the granting of this application: by ticking the following box: Yes, we will □.

Please describe your experience and expertise, and that of your collaborators, and how this will be applied to the proposed study (in 250 words).




Please provide a list of recent publications (max. 10).















































Appendix A: Available phenotypes

Anthropometry:

Anthropometry_Age xx.x (i.e. years + 1 decimal)

Height(cm)

Weight(kg)

Lipid phenotypes:

Lipids_BloodSampling_Age

Lipids_BloodSampling_Date

Lipids_BloodSampling_Time

Lipids_BloodSampling_Fasting

TotChol(mmol/L)

HDLchol(mmol/L)

Triglycerides(mmol/L)

LipidsMed_Age

LipidMed



Technical covariates:

Subject_id

Ascertainment_criterion Inclusion criterion biobank/selected samples

GWAS_ChipType(s)

GWAS_DataGeneration_Date

DNA_BloodSampling_Age

DNA_BloodSampling_Date

DNA_BloodSampling_Time

DNA_Source Whole blood, other

DNA_Extraction_Method

DNA_Extraction_Date

DNA_QuantificationMethod

DNA_A260/A280

RNA_BloodSampling_Age

RNA_Sampling_Date

RNA_Sampling_Time

RNA_Source Pax gene, other

RNA_Extraction_Date

RNA_Extraction_Method

RNA_RIN

RNA_A260/280

BirthYear xxxx (e.g. 1969)

Sex 0=male/1=female

Smoking



Blood parameters:

CRP_BloodSampling_Age

CRP_BloodSampling_Date

CRP_BloodSampling_Time

hsCRP(mg/L)

CellCount_BloodSampling_Age

CellCount_BloodSampling_Date

CellCount_BloodSampling_Time

WhiteBloodcellCount-WBC(x10^9cells/L)

RedBloodcellCount-RBC(x10^12cells/L)

Hemoglobulin-HGB(mmol/L)

Hematocrit-HCT(L/L)

MeanCorpuscularVolume-MCV(fL)

MeanCorpuscularHemoglobin-MCH(fmol)

MeanCorpuscularHemoglobineConcentration-

MCHC(mmol/L)

CorpuscularHemoglobinConcentrationMean-

CHCM(mmol/L)

CorpuscularHemoglobinContent-CH(fmol/L)

RedCellVolumeDistributionWidth-RDW(%)

HemoglobinConcentrationDistributionWidth-

HDW(mmol/L)

PlateletCount-PLT(x10^9cells/L)

MeanPlateletVolume-MPV(fL)

NeutrophilCount(10^9/L)

LymphocyteCount(10^9/

MonocyteCount(10^9/L

EosinophilCount(10^9/L)

BasophilCount(10^9/L)

LargeUnstainedCells-LUC(10^9/L)

Neut(%)

Lymph(%)

Mono(%)

Eos(%)

Baso(%)

LargeUnstainedCells-LUC(%)







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Tags: access application, request access, bbmrirp3, access, application